Bacterial pneumonia, not elsewhere classified

DOID EFO MESH SNOMED PheWeb

J10_PNEUMOBACTEROTH

bacterial pneumonia: Inflammation of the lung parenchyma that is caused by bacterial infections.

Endpoint definition

↥

FinnGen phenotype data

321302 individuals

Apply sex-specific rule None

321302

Check conditions None

321302

Filter registries

Hospital Discharge: ICD-10 J15, J17.0*, J17.0*A01.0, J17.0*A02.2, J17.0*A21.2, J17.0*A22.1, J17.0*A37.9, J17.0*A42.0, J17.0*A43.0, J17.0*A54.8

Hospital discharge: ICD-9 482

Hospital discharge: ICD-8 482

Hospital discharge: excluded ICD-9 4822

Hospital discharge: excluded ICD-8 48210

Cause of death: ICD-10 J15, J17.0*, J17.0*A01.0, J17.0*A02.2, J17.0*A21.2, J17.0*A22.1, J17.0*A37.9, J17.0*A42.0, J17.0*A43.0, J17.0*A54.8

Cause of death: ICD-9 482

Cause of death: ICD-8 482

Cause of death: excluded ICD-9 4822

Cause of death: excluded ICD-8 48210

12337

Check pre-conditions, main-only, mode, ICD version

Look only at ICD versions H.D: 10, 8, 9 ; C.O.D: 10, 8, 9

12311

Check minimum number of events None

12311

Include endpoints None

12311

J10_PNEUMOBACTEROTH

Extra metadata

Level in the ICD hierarchy 4

First used in FinnGen datafreeze DF2

Similar endpoints

↥

List of similar endpoints to Bacterial pneumonia, not elsewhere classified based on the number of shared cases.

Broader endpoints:

Narrower endpoints:

None

Show all endpoint correlations

Summary Statistics

↥

Key figures

	All	Female	Male
Number of individuals	11881	4979	6902
Unadjusted prevalence (%)	3.85	2.87	5.11
Mean age at first event (years)	58.36	53.27	62.03

Mortality

Follow-up	Absolute risk	HR [95% CI]	p	N
1998–2019	0.07	5.79 [4.85, 6.92]	2.1e-83	3741
15 years	0.01	2.06 [1.76, 2.42]	4.3e-19	952
5 years	0.01	5.39 [4.77, 6.09]	<1e-100	1038
1 year	0.01	31.53 [27.72, 35.86]	<1e-100	1622

Age distribution of first events

Year distribution of first events

Cumulative Incidence

Correlations

↥

Index endpoint: J10_PNEUMOBACTEROTH – Bacterial pneumonia, not elsewhere classified
GWS hits: 0

Survival analyses between endpoints

↥

Plot

before Bacterial pneumonia, not elsewhere classified
after Bacterial pneumonia, not elsewhere classified

Loading survival analyses plot

Table

Loading survival analyses table

Drugs most likely to be purchased after Bacterial pneumonia, not elsewhere classified

↥